Retrieval Augmented Biomedical Question Answering with Weak Question Recovery and Neural Reranking for BioASQ Task 14b
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Computer Science > Computation and Language
Title:Retrieval Augmented Biomedical Question Answering with Weak Question Recovery and Neural Reranking for BioASQ Task 14b
Abstract:This work presents DS@GT ARC BioASQ team's work for a biomedical question answering pipeline, integrating multi-source query expansion, neural reranking, retrieval refinement, and OpenBioLLM-assisted answer generation. The system combines PubMed retrieval with fine-tuned MiniLM-based semantic reranking, Reciprocal Rank Fusion (RRF), and feature-based relevance scoring to improve document ranking quality. To address challenging queries with weak retrieval performance, we introduce a conditional weak-question recovery strategy that applies semantic expansion, relationship-aware augmentation, and selective result merging. A post-retrieval pruning stage further removes redundant or low-relevance snippets while preserving evidence coverage for downstream answer generation. Experimental results on BioASQ evaluation batches demonstrate that the proposed recovery and cleanup strategies substantially improve retrieval robustness and MAP@10 performance on difficult question sets. The final system also incorporates output validation and post-processing steps to ensure formatting consistency and submission reliability across BioASQ phases.
| Subjects: | Computation and Language (cs.CL); Artificial Intelligence (cs.AI) |
| Cite as: | arXiv:2608.01468 [cs.CL] |
| (or arXiv:2608.01468v1 [cs.CL] for this version) | |
| https://doi.org/10.48550/arXiv.2608.01468
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