arXiv — NLP / Computation & Language · · 3 min read

PaperCompiler: Faithful Paper-to-Code Generation via Repository-Level Specification Compilation

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Computer Science > Computation and Language

arXiv:2609.02272 (cs)
[Submitted on 2 Sep 2026]

Title:PaperCompiler: Faithful Paper-to-Code Generation via Repository-Level Specification Compilation

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Abstract:Faithfully translating research papers into repository-level implementations remains challenging because papers often describe methods at a high level, leave implementation assumptions implicit, and require generated repositories to preserve method logic, evaluation protocols, and cross-file consistency. Despite recent advances in paper-to-code agents, their intermediate outputs are often presented as free-form plans or summaries that downstream coding agents may ignore, reinterpret, or compress, leading to algorithmic simplification and inconsistent repository structure. To address these challenges, we introduce PaperCompiler, a paper-to-code generation framework that compiles paper-grounded evidence into explicit repository-level implementation specifications. PaperCompiler grounds implementation-relevant evidence while preserving source provenance and distinguishing paper-supported, inferred, externally delegated, and unresolved information. The resulting specifications encode non-degradation requirements, ownership assignments, cross-file dependencies, and file-level constraints. Repository generation proceeds under these compiled specifications while retaining flexibility over local engineering choices not fixed by the paper. PaperCompiler outperforms strong baselines on Paper2CodeBench, achieving a 13.8% relative improvement in reference-based fidelity (from 3.64 to 4.15) and reducing high-severity evaluator critiques (from 13.2% to 6.1%).
Comments: 9 pages
Subjects: Computation and Language (cs.CL); Artificial Intelligence (cs.AI); Software Engineering (cs.SE)
Cite as: arXiv:2609.02272 [cs.CL]
  (or arXiv:2609.02272v1 [cs.CL] for this version)
  https://doi.org/10.48550/arXiv.2609.02272
arXiv-issued DOI via DataCite (pending registration)

Submission history

From: Jaehong Yoon [view email]
[v1] Wed, 2 Sep 2026 08:21:03 UTC (803 KB)
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