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INDEQS: Informed Neural controlled Differential EQuationS

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Computer Science > Machine Learning

arXiv:2606.19138 (cs)
[Submitted on 17 Jun 2026]

Title:INDEQS: Informed Neural controlled Differential EQuationS

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Abstract:Neural Controlled Differential Equations (NCDE) provide a powerful continuous-time framework for forecasting time series, but standard graph-based extensions typically learn spatial structure purely from data, even in settings where a directed graph structure is known a priori. We introduce Informed Neural controlled Differential EQuationS (INDEQS), a graph-based NCDE forecasting method that incorporates prior knowledge of a directed graph at distinct architectural positions. INDEQS separates inner mixing of hidden states across graph nodes from outer mixing between vector field and control, and offers both a lightweight graph-constrained variant and a more expressive variant, learning additional graph connections from data via adaptive graph convolutions. To systematically study when graph informedness is beneficial in forecasting, we devise a continuous advection simulation on directed graphs, yielding synthetic spatio-temporal datasets with known ground-truth flow structure. We then evaluate INDEQS on two real-world tasks: river discharge forecasting on a hydrological network and traffic flow prediction on PeMS08. Across these synthetic and real-world benchmarks, outer informedness consistently improves mean absolute error over an uninformed NCDE with comparable parameter count, particularly on larger graphs, while inner informedness offers a more parameter-efficient alternative when strict adherence to a known adjacency is desired. A comparison of discrete convolutional and continuous-time decoders further shows that continuous decoders yield better accuracy and greater temporal flexibility on real-world tasks. An implementation of INDEQS and the advection simulation is available at this https URL.
Subjects: Machine Learning (cs.LG); Machine Learning (stat.ML)
ACM classes: I.2; I.5; G.1.7; G.2.2; G.3; I.6
Cite as: arXiv:2606.19138 [cs.LG]
  (or arXiv:2606.19138v1 [cs.LG] for this version)
  https://doi.org/10.48550/arXiv.2606.19138
arXiv-issued DOI via DataCite (pending registration)

Submission history

From: Michael Detzel [view email]
[v1] Wed, 17 Jun 2026 14:46:23 UTC (744 KB)
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