arXiv — Machine Learning · · 3 min read

Provably Communication-Efficient and Privacy-Preserving Federated Graph Neural Networks

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Computer Science > Machine Learning

arXiv:2605.26243 (cs)
[Submitted on 25 May 2026]

Title:Provably Communication-Efficient and Privacy-Preserving Federated Graph Neural Networks

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Abstract:Graph neural networks (GNNs) achieve strong performance on relational data, but real-world graphs are often distributed across organizations that cannot share raw data due to privacy and policy constraints. Existing federated GNN methods either ignore cross-client links, leading to degraded accuracy, or require frequent embedding exchanges, incurring substantial communication and privacy costs. We propose CE-FedGNN, a communication-efficient and privacy-preserving federated GNN framework for learning over such coupled graphs. Our approach avoids sharing raw data or per-round embeddings by infrequently exchanging aggregated node representations. To handle cross-client dependency and staleness, we introduce a moving-average estimator that continuously tracks node representations and enables their stable reuse across rounds. To provide formal privacy guarantees for the released representations, we adopt the metric differential privacy (metric-DP) framework, which measures privacy with respect to distances in the learned embedding space rather than worst-case input perturbations. This yields meaningful guarantees at noise levels where standard differential privacy becomes overly conservative. We establish convergence to a stationary point at a rate of $O(1/\sqrt{T})$ with $O(T^{3/4})$ communication complexity. In addition, we derive $(\varepsilon,\delta)$-metric-DP guarantees via Rényi differential privacy composition under a public-cohort threat model. Experiments on synthetic interbank anti-money laundering benchmarks and citation networks demonstrate that CE-FedGNN achieves strong performance while significantly reducing communication and maintaining robustness under privacy-preserving noise.
Subjects: Machine Learning (cs.LG)
Cite as: arXiv:2605.26243 [cs.LG]
  (or arXiv:2605.26243v1 [cs.LG] for this version)
  https://doi.org/10.48550/arXiv.2605.26243
arXiv-issued DOI via DataCite (pending registration)

Submission history

From: Zhishuai Guo [view email]
[v1] Mon, 25 May 2026 18:10:20 UTC (685 KB)
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