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Topological Flow Matching

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Computer Science > Machine Learning

arXiv:2606.15897 (cs)
[Submitted on 14 Jun 2026]

Title:Topological Flow Matching

View a PDF of the paper titled Topological Flow Matching, by Kacper Wyrwal and 2 other authors
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Abstract:Flow matching is a powerful generative modeling framework, valued for its simplicity and strong empirical performance. However, its standard formulation treats signals on structured spaces, such as fMRI data on brain graphs, as points in Euclidean space, overlooking the rich topological features of their domains. To address this, we introduce topological flow matching, a topology-aware generalization of flow matching. We interpret flow matching as a framework for solving a degenerate Schrödinger bridge problem and inject topological information by augmenting the reference process with a Laplacian-derived drift. This principled modification captures the structure of the underlying domain while preserving the desirable properties of flow matching: a stable, simulation-free objective and deterministic sample paths. As a result, our framework serves as a drop-in replacement for standard flow matching. We demonstrate its effectiveness on diverse structured datasets, including brain fMRIs, ocean currents, seismic events, and traffic flows.
Comments: Accepted at ICLR 2026. 26 pages, 24 figures. Code: this https URL
Subjects: Machine Learning (cs.LG); Artificial Intelligence (cs.AI); Machine Learning (stat.ML)
Cite as: arXiv:2606.15897 [cs.LG]
  (or arXiv:2606.15897v1 [cs.LG] for this version)
  https://doi.org/10.48550/arXiv.2606.15897
arXiv-issued DOI via DataCite (pending registration)

Submission history

From: Kacper Wyrwal [view email]
[v1] Sun, 14 Jun 2026 16:29:33 UTC (3,663 KB)
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