arXiv — Machine Learning · · 3 min read

Imputation Meets Clustering: Exploiting Latent Subgroup Structure for Missing Data Recovery

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Computer Science > Machine Learning

arXiv:2607.06930 (cs)
[Submitted on 8 Jul 2026]

Title:Imputation Meets Clustering: Exploiting Latent Subgroup Structure for Missing Data Recovery

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Abstract:Missing data is prevalent in practical applications, making effective imputation an essential preprocessing step for downstream analysis. Real-world datasets often exhibit complex latent structures composed of multiple subgroups with distinct distributions. However, existing methods often overlook such population heterogeneity. Without explicit structural guidance, these methods tend to produce generic estimates that blur subgroup boundaries and lack instance-level fidelity. While incorporating subgroup information offers a remedy, it faces a circular dependency: reliable subgroup identification requires complete data, while data completion is the imputation objective itself. To resolve this, we propose CAGI (Cluster-Aware Generative Imputation), a framework that reformulates clustering and imputation as a mutually reinforcing co-optimization process. CAGI employs a ``Partition-Guide-Restore'' strategy where dynamic cluster assignments act as local priors to condition a Generative Adversarial Network. An iterative feedback loop is established to progressively refine both cluster structures and imputed values toward faithful subgroup distributions. To ensure distributional stability, CAGI further employs a multi-level optimization objective combining instance-level reconstruction with distribution-level regularization. Extensive experiments on 14 benchmark datasets with 15 representative baselines demonstrate the superiority of CAGI. The source code is available at: this https URL
Comments: Accepted to ECML-PKDD 2026
Subjects: Machine Learning (cs.LG); Artificial Intelligence (cs.AI)
Cite as: arXiv:2607.06930 [cs.LG]
  (or arXiv:2607.06930v1 [cs.LG] for this version)
  https://doi.org/10.48550/arXiv.2607.06930
arXiv-issued DOI via DataCite (pending registration)

Submission history

From: Yiqun Zhang [view email]
[v1] Wed, 8 Jul 2026 02:50:02 UTC (5,114 KB)
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