Deep Learning for Protein Complex Prediction and Design
Mirrored from arXiv — Machine Learning for archival readability. Support the source by reading on the original site.
Computer Science > Machine Learning
Title:Deep Learning for Protein Complex Prediction and Design
Abstract:Accurately modeling and designing protein complex structures is a central problem in computational structural biology, with broad implications for understanding cellular function and developing therapeutics. This thesis investigates two fundamental aspects of this problem using deep learning: domain-specific architectures that capture the hierarchical nature of protein structures, and search algorithms that efficiently navigate the vast sequence spaces of protein complexes to identify interacting homologs for improving complex structure prediction and to design protein sequences.
| Comments: | PhD thesis |
| Subjects: | Machine Learning (cs.LG); Biomolecules (q-bio.BM) |
| Cite as: | arXiv:2605.11189 [cs.LG] |
| (or arXiv:2605.11189v1 [cs.LG] for this version) | |
| https://doi.org/10.48550/arXiv.2605.11189
arXiv-issued DOI via DataCite (pending registration)
|
Access Paper:
- View PDF
- HTML (experimental)
- TeX Source
Current browse context:
References & Citations
Bibliographic and Citation Tools
Code, Data and Media Associated with this Article
Demos
Recommenders and Search Tools
arXivLabs: experimental projects with community collaborators
arXivLabs is a framework that allows collaborators to develop and share new arXiv features directly on our website.
Both individuals and organizations that work with arXivLabs have embraced and accepted our values of openness, community, excellence, and user data privacy. arXiv is committed to these values and only works with partners that adhere to them.
Have an idea for a project that will add value for arXiv's community? Learn more about arXivLabs.
More from arXiv — Machine Learning
-
Interpretable EEG Microstate Discovery via Variational Deep Embedding: A Systematic Architecture Search with Multi-Quadrant Evaluation
May 13
-
QuIDE: Mastering the Quantized Intelligence Trade-off via Active Optimization
May 13
-
Steering Without Breaking: Mechanistically Informed Interventions for Discrete Diffusion Language Models
May 13
-
Rotation-Preserving Supervised Fine-Tuning
May 13
Discussion (0)
Sign in to join the discussion. Free account, 30 seconds — email code or GitHub.
Sign in →No comments yet. Sign in and be the first to say something.